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Malignant Melanoma, Mutations, and Modifying Immune Responses

Mar 25, 2021 10:45:31 AM / by Champions Oncology

Malignant Melanoma Mutation

Melanoma broadly defines cancers that originate in melanocytes in the skin, eye, and inner ear. Cutaneous malignant melanoma is one of the most aggressive and fatal forms of this disease, but advances in immuno-oncology have dramatically improved outcomes1.  Advances in cancer genomics have been critical to evaluating which mutations are involved in a shift toward metastasis and have been valuable to informing treatment options using novel inhibitors that target specific gene mutations. Here we highlight mutations that are critical to tumor formation and metastasis and feature immuno-oncology treatments that are in use or being evaluated as individual or combination treatments.

Mutations matter

Mutations in the BRAF gene have been linked to malignant melanoma and are thought to be present in more than half of these malignant tumors. The BRAF gene encodes RAF proteins, which are serine/threonine kinases that are involved in the MAPK signaling pathways and play critical roles in cell proliferation, differentiation, and survival, and are critical to driving a metastatic process defined by the epithelial-to-mesenchymal transition2. Many malignant melanomas have mutations in BRAF, particularly the V600E mutation and are also likely to have mutations in KRAS or NRAS genes, which results in hyperactivation of MAPK signaling and elevated oncogenic signaling via MEK3. Numerous preclinical and clinical studies have sought to identify BRAF inhibitors that target mutations based on their effects on other signaling partners like RAS or RTK. Several phase III studies suggested that combination therapy with BRAF and MEK inhibitors could improve progression-free survival and overall survival4,5, but some patients develop resistance to BRAF inhibitors, usually due to secondary genetic or epigenetic changes that target other components of MAPK signaling or alternative signaling pathways6. BRAF mutations may be coupled with silencing of tumor suppressor genes that are critical drivers of hyperplasia and malignancy. Epigenetic silencing of the PTEN tumor suppressor coupled with the BRAF V600E mutation can promote melanoma metastasis in mouse models7, and patients with both BRAF mutations and loss of PTEN have worse outcomes8.


Immune checkpoint inhibitors and melanoma

Immune checkpoint inhibitors (ICIs) have transformed the treatment of metastatic melanoma. These treatments are monoclonal antibodies that bind to immune checkpoint molecules or receptors on the surface of T cells or tumor cells, which breaks immune tolerance and allows T cells to mount anti-tumor responses. PD-1/PD-L1 and CTLA-4 are current targets of FDA-approved ICIs (ipilimumab for CTLA-4 and nivolumab/pembrolizumab/atezolizumab) for PD-1/PD-L1) that have been approved to treat metastatic melanoma, but these treatments have also faced the challenges of treatment resistance or toxicities. PTEN loss in patients has been linked with poor anti-tumor T cell responses upon PD-1 blockade, likely due to increased production of immunosuppressive cytokines and poor infiltration of cytotoxic T cells into tumor sites9.  Clinical trials using PD-1 blockade with BRAF and/or MEK inhibitors have shown promising results in progression-free survival for BRAF V600E-positive advanced melanoma and metastatic melanoma patients10, and larger trials are underway to further validate these findings.


Across the immuno-oncology landscape, combined therapies that target multiple mechanisms are yielding promising results for otherwise refractory cancers like metastatic melanoma. Cancer genomics have revealed how mutations are critical to initiating tumor cell growth and metastasis. There is still a lack of effective inhibitors that target tumor suppressors therapeutically, and ICI treatments can cause potentially dangerous side effects due to shifts in the immune response. Future research on metastatic melanoma is likely to yield improvements in genomic diagnosis and better targeted therapies.

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7. Dankort D, Curley DP, Cartlidge RA, et al. Braf(V600E) cooperates with Pten loss to induce metastatic melanoma. Nat Genet. 2009;41(5):544-552.

8. Bucheit AD, Chen G, Siroy AE, Tetzlaff M, Broaddus RR, Milton DR, et al. Complete loss of PTEN protein expression correlates with shorter time to brain metastasis and survival in stage IIIB/C melanoma patients with BRAFV600 mutations. Clin Cancer Res. 2014;20:5527–36.

9. Peng W, Chen JQ, Liu C, et al. Loss of PTEN Promotes Resistance to T Cell-Mediated Immunotherapy. Cancer Discov. 2016;6(2):202-216.

10. Gutzmer, Ralf, et al. "Atezolizumab, vemurafenib, and cobimetinib as first-line treatment for unresectable advanced BRAFV600 mutation-positive melanoma (IMspire150): Primary analysis of the randomised, double-blind, placebo-controlled, phase 3 trial." The Lancet 395.10240 (2020): 1835-1844.

Tags: Solid Tumor Oncology